John,
Sorry for the delay in responding. No, this is definitely not desirable behaviour. In fact it makes the instrument unusable as a MIDI controller. Let me explain a bit more. I don't have my Alpha with me, so I can't tell which specific MIDI notes have the problem but, just for example, you want to play C3 in your melody, however C3 also surprisingly toggles the metronome on and off! Obviously not what you want to happen! You play D4, and as well as playing the note, it shifts all the notes up one octave. It isn't actually these notes, C3 and D4, I've just used them for illustration. I don't have my instrument with me so I can't sit down and do the forensics. In my bug report a few months ago, I did identify the MIDI note that toggles the metronome. This behaviour is most easily observed if you use the chromatic scale, since you are then bound to have the offending notes represented in the courses.
As I said I observed the problem with the metronome toggle a few months ago and reported it and I seem to remember it being acknowledged as a bug. Frankly, I haven't used the instrument as a MIDI controller since, so I don't know whether the problem went away and came back again or whether it's always been there.
I only realised that some notes were also toggling the octave this weekend when I couldn't work out why in the middle of playing something the notes suddenly shifted an octave up.
So, in conclusion, when using MIDI out, and playing the note keys, some notes also undesirably activate the metronome and octave switches. I really can't believe that this is intentional. Could I somehow unintentionally have assigned note keys to metronome and octave switching functions if such a thing is possible? Seems unlikely as I started with a fresh install of Factory Set-up 1.
Regards, Nick